Classes
class	ConventionalProfileProcessing

class	DataExtractor

class	GaussianThinning

class	GeoVaLs

class	HistoryCheck

class	LinearObsBiasOperator

class	LocationsTimeTestParameters
	Parameters describing Locations/TimeMask test. More...

class	LocationsTestParameters
	Parameters describing Locations test. More...

class	LocationsTestFixture
	Code shared by all Locations tests. More...

class	Locations

class	MetOfficeBuddyCheck

class	MetOfficeBuddyPairFinder

class	MetOfficeRadianceErrorMatrices

class	MetOfficeSort

class	ObsBias

class	ObsBiasCovarianceDetails

class	ObsDiagnostics

class	ObsErrorAssign

class	ObsFilterData

class	CompareVariablesParameters
	Options used to configure comparison of a variable generated by a filter against a reference variable loaded from the input IODA file. More...

class	ObsTypeParameters
	Options used to configure a test running a sequence of filters on observations from a single obs space. More...

class	ObsFiltersParameters
	Top-level options taken by the ObsFilters test. More...

class	ObsFilters

class	ObsFunction

class	TestFixture
	Code shared by all tests. More...

class	OperatorUtils

class	ParallelPoissonDiskThinning

class	MyParameters

class	Parameters

class	PiecewiseLinearInterpolation

class	PoissonDiskThinning

class	Predictor

class	TestCaseParameters

class	PrimitiveVariables

class	TestParameters

class	ProcessWhere

class	RecursiveSplitter

class	StuckCheck

class	TemporalThinning

class	TrackCheck

class	TrackCheckShip

class	TrackCheckShipMainLoop

class	Variables

Typedefs
typedef std::pair< int, int >	ObsPair

typedef std::set< size_t >	Group

typedef std::set< Group >	Groups

Functions
void	testConventionalProfileProcessing (const eckit::LocalConfiguration &conf)

template<typename T , typename R >
float	run_basic (const T obVal0, const R obVal1, const std::vector< T > &varValues0, const std::vector< R > &varValues1)

template<typename T , typename R >
float	run_basic (const T obVal0, const R obVal1)

	CASE ("ufo/DataExtractor/bilinearinterp/float_linear")

	CASE ("ufo/DataExtractor/bilinearinterp/float_linear_at_lower_boundary_dim0")

	CASE ("ufo/DataExtractor/bilinearinterp/float_linear_at_lower_boundary_dim1")

	CASE ("ufo/DataExtractor/bilinearinterp/float_blinear")

	CASE ("ufo/DataExtractor/bilinearinterp/extrapolation_lower_bound_dim0")

	CASE ("ufo/DataExtractor/bilinearinterp/extrapolation_lower_bound_dim1")

	CASE ("ufo/DataExtractor/bilinearinterp/extrapolation_upper_bound_dim0")

	CASE ("ufo/DataExtractor/bilinearinterp/extrapolation_upper_bound_dim1")

	CASE ("ufo/DataExtractor/bilinearinterp/int_int_dtype")

	CASE ("ufo/DataExtractor/bilinearinterp/int_float_dtype")

	CASE ("ufo/DataExtractor/bilinearinterp/float_int_dtype")

	CASE ("ufo/DataExtractor/bilinearinterp/string_dtype")

float	run_missing (const float obVal0, const float obVal1, const std::vector< float > data)

	CASE ("ufo/DataExtractor/bilinearinterp/one_missing")

	CASE ("ufo/DataExtractor/bilinearinterp/all_missing")

float	run_range_constrained (const float obVal0, const float obVal1, const std::array< ConstrainedRange, 3 > &ranges)

	CASE ("ufo/DataExtractor/bilinearinterp/range_constrain")

	CASE ("ufo/DataExtractor/bilinearinterp/range_constrain_extrapolation")

	CASE ("ufo/DataExtractor/bilinearinterp/range_constrain_3D_array")

	CASE ("ufo/DataExtractor/get2DSlice/not_2d_slice")

	CASE ("ufo/DataExtractor/get1DSlice/not_1d_slice")

void	testGaussianThinning (const eckit::LocalConfiguration &conf)

void	testGeoVaLs ()

void	testGeoVaLsAllocatePutGet ()
	Tests GeoVaLs::allocate, GeoVals::put, GeoVaLs::get, GeoVaLs::putAtLevel, GeoVaLs::getAtLevel, GeoVaLs::putAtLocation and GeoVaLs::getAtLocation. More...

void	testGeoVaLsConstructor ()
	Tests GeoVaLs(const Locations &, const Variables &, const std::vector<size_t> &) constructor. Tests that levels get correctly allocated, and that the GeoVaLs are zeroed out. More...

void	testHistoryCheck (const eckit::LocalConfiguration &conf)

	CASE ("ufo/LinearObsBiasOperator/testLinearObsBiasOperator")

void	testLocations ()
	Tests Locations constructors and method size() More...

void	testLonsLats ()
	Tests Locations accessors lons() and lats() More...

int	test_locations_lonslats_f90 (const Locations &, const eckit::Configuration &)

void	testFortranLonsLats ()
	Tests Locations accessors lons() and lats() from Fortran. More...

void	testTimeMask ()
	Tests Locations::isInTimeWindow method. More...

int	test_locations_timemask_f90 (const Locations &, const eckit::Configuration &)

void	testFortranTimeMask ()
	Tests Locations::isInTimeWindow method from Fortran. More...

void	testConcatenate ()
	Tests operator+= (concatenation of two Locations) More...

void	testMetOfficeBuddyCheck (const eckit::LocalConfiguration &conf)

bool	duplicatePairsPresent (const std::vector< ObsPair > &pairs)

template<typename Key , typename Value >
Value	maxValue (const std::map< Key, Value > &map)

int	maxTotalNumBuddies (const std::vector< ObsPair > &pairs)

int	maxNumBuddiesWithSameStationId (const std::vector< ObsPair > &pairs, const std::vector< int > &stationIds)

void	testDuplicatesAndBuddyCountConstraints (const eckit::LocalConfiguration &conf)

	CASE ("ufo/MetOfficeBuddyPairFinder/" "Duplicates, constraints on buddy counts, legacy pair collector")

std::vector< MetOfficeBuddyPair >	findBuddyPairs (const MetOfficeBuddyCheckParameters &options, const std::vector< float > &latitudes, const std::vector< float > &longitudes, const std::vector< util::DateTime > &datetimes, const std::vector< float > *pressures, const std::vector< int > &stationIds, const std::vector< size_t > &validObsIds)

void	testInvarianceToLongitude (const eckit::LocalConfiguration &conf)

	CASE ("ufo/TemporalThinning/Invariance to longitude, different zonal bands")

	CASE ("ufo/TemporalThinning/Invariance to longitude, same zonal band")

void	findEndpoint (double startLat, double startLon, double distance, double bearing, double &endLat, double &endLon)

void	findEndpoint (float startLat, float startLon, float distance, float bearing, float &endLat, float &endLon)

template<typename T >
bool	contains (const std::set< T > &set, const T &element)

ObsPair	reverse (const ObsPair &pair)

void	testSearchRadius (const eckit::LocalConfiguration &conf)

	CASE ("ufo/TemporalThinning/Search radius")

void	testMetOfficeRadianceErrorMatrices (const eckit::LocalConfiguration &conf)

	CASE ("ufo/MetOfficeSort/noKey")

	CASE ("ufo/MetOfficeSort/withKey")

void	testObsBiasReadWrite ()
	Tests ObsBias::read and ObsBias::write methods. More...

void	testObsBiasCovarianceDetails ()

void	testObsDiagnostics ()

void	testObsErrorAssign (const eckit::LocalConfiguration &conf)

template<typename T >
void	testHasDtypeAndGet (const ufo::ObsFilterData &data, ioda::ObsSpace &ospace, const ufo::Variable &var, ioda::ObsDtype expectedDtype, const std::vector< T > &expectedValues)

void	testObsFilterData ()

void	runFinalCheck (oops::ObsSpace< ufo::ObsTraits > &obsspace, oops::ObsDataVector< ufo::ObsTraits, int > &qcflags, oops::ObsVector< ufo::ObsTraits > &obserr)
	Run the FinalCheck filter. More...

void	convertLocalObsIndicesToGlobal (std::vector< size_t > &indices, const std::vector< size_t > &globalIdxFromLocalIdx)
	Convert indices of observations held by this process to global observation indices. More...

template<typename Predicate >
std::vector< size_t >	getObservationIndicesWhere (const ObsTraits::ObsDataVector< int > &qcFlags, const eckit::mpi::Comm &comm, const std::vector< size_t > &globalIdxFromLocalIdx, const Predicate &predicate)

std::vector< size_t >	getPassedObservationIndices (const ObsTraits::ObsDataVector< int > &qcFlags, const eckit::mpi::Comm &comm, const std::vector< size_t > &globalIdxFromLocalIdx)

std::vector< size_t >	getFailedObservationIndices (const ObsTraits::ObsDataVector< int > &qcFlags, const eckit::mpi::Comm &comm, const std::vector< size_t > &globalIdxFromLocalIdx)

std::vector< size_t >	getFlaggedObservationIndices (const ObsTraits::ObsDataVector< int > &qcFlags, const eckit::mpi::Comm &comm, const std::vector< size_t > &globalIdxFromLocalIdx, int flag)

size_t	numNonzero (const ObsTraits::ObsDataVector< int > &data, const ioda::Distribution &dist)

size_t	numEqualTo (const ObsTraits::ObsDataVector< int > &data, int value, const ioda::Distribution &dist)

template<typename T >
void	expectVariablesEqual (const ObsTraits::ObsSpace &obsspace, const ufo::Variable &referenceVariable, const ufo::Variable &testVariable)

void	expectVariablesApproximatelyEqual (const ObsTraits::ObsSpace &obsspace, const ufo::Variable &referenceVariable, const ufo::Variable &testVariable, float absTol)

void	expectVariablesRelativelyEqual (const ObsTraits::ObsSpace &obsspace, const ufo::Variable &referenceVariable, const ufo::Variable &testVariable, float relTol)

void	testFilters (size_t obsSpaceIndex, oops::ObsSpace< ufo::ObsTraits > &obspace, const ObsTypeParameters &params)

void	runTest ()

void	dataVectorDiff (const ioda::ObsSpace &ospace, ioda::ObsDataVector< float > &vals, const ioda::ObsDataVector< float > &ref, std::vector< float > &rms_out, size_t &num_missing_mismatches)

template<typename T >
void	checkResults (const ioda::ObsSpace &, const eckit::Configuration &, const ioda::ObsDataVector< T > &vals, const ioda::ObsDataVector< T > &vals_ofd, const ioda::ObsDataVector< T > &ref)

void	checkResults (const ioda::ObsSpace &ospace, const eckit::Configuration &obsfuncconf, ioda::ObsDataVector< float > &vals, ioda::ObsDataVector< float > &vals_ofd, const ioda::ObsDataVector< float > &ref)

template<typename T >
void	doTestFunction (ioda::ObsSpace &ospace, const eckit::Configuration &conf)

void	testFunction ()

void	testOperatorUtils (const eckit::LocalConfiguration &conf)

	CASE ("ufo/OperatorUtils/Without 'variables' option")

	CASE ("ufo/OperatorUtils/With 'variables' option")

void	testPoissonDiskThinning (const eckit::LocalConfiguration &conf, bool expectValidationError=false)

template<typename ParametersType >
void	doTestSerialization (const eckit::Configuration &config)

void	testDefaultValue ()

void	testCorrectValue ()

void	testSimpleString ()

void	testNoChannels ()

void	testComplexChannels ()

void	testMissingName ()

void	testMisspelledProperty ()

void	testSerializationWithChannels ()

void	testSerializationWithoutChannels ()

	CASE ("ufo/PiecewiseLinearInterpolation/atInterpolationPoints")

	CASE ("ufo/PiecewiseLinearInterpolation/betweenInterpolationPoints")

	CASE ("ufo/PiecewiseLinearInterpolation/outsideInterpolationPoints")

	CASE ("ufo/PiecewiseLinearInterpolation/singleInterpolationPoint")

	CASE ("ufo/PiecewiseLinearInterpolation/noInterpolationPoints")

	CASE ("ufo/PiecewiseLinearInterpolation/differentNumberOfAbscissasAndOrdinates")

	CASE ("ufo/PoissonDiskThinning/No thinning")

	CASE ("ufo/PoissonDiskThinning/" "Horizontal thinning, min spacing smaller than nearest neighbor spacing")

	CASE ("ufo/PoissonDiskThinning/" "Horizontal thinning, min spacing larger than nearest neighbor spacing")

	CASE ("ufo/PoissonDiskThinning/" "Vertical thinning, min spacing smaller than nearest neighbor spacing")

	CASE ("ufo/PoissonDiskThinning/" "Vertical thinning, min spacing larger than nearest neighbor spacing")

	CASE ("ufo/PoissonDiskThinning/Vertical thinning, where clause")

	CASE ("ufo/PoissonDiskThinning/" "Time thinning, min spacing equal to nearest neighbor spacing")

	CASE ("ufo/PoissonDiskThinning/" "Time thinning, min spacing larger than nearest neighbor spacing")

	CASE ("ufo/PoissonDiskThinning/" "Horizontal and vertical thinning, min spacing larger than nearest neighbor spacing")

	CASE ("ufo/PoissonDiskThinning/" "Horizontal and time thinning, min spacing larger than nearest neighbor spacing")

	CASE ("ufo/PoissonDiskThinning/" "Vertical and time thinning, min spacing larger than nearest neighbor spacing")

	CASE ("ufo/PoissonDiskThinning/" "Horizontal, vertical and time thinning, min spacing larger than nearest neighbor spacing")

	CASE ("ufo/PoissonDiskThinning/Priorities")

	CASE ("ufo/PoissonDiskThinning/Int-valued categories")

	CASE ("ufo/PoissonDiskThinning/String-valued categories")

	CASE ("ufo/PoissonDiskThinning/Variable min spacings")

	CASE ("ufo/PoissonDiskThinning/Variable min spacings, shuffling")

	CASE ("ufo/PoissonDiskThinning/Cylindrical exclusion volumes")

	CASE ("ufo/PoissonDiskThinning/Ellipsoidal exclusion volumes")

	CASE ("ufo/PoissonDiskThinning/Incorrectly ordered min horizontal spacings")

	CASE ("ufo/PoissonDiskThinning/Incorrectly ordered min vertical spacings")

	CASE ("ufo/PoissonDiskThinning/Incorrectly ordered min time spacings")

void	testPredictor ()

void	testPrimitiveVariables (const eckit::LocalConfiguration &conf)
	Test a range-based for loop over the PrimitiveVariables range. More...

void	testPrimitiveVariablesIterator (const eckit::LocalConfiguration &conf)

void	testProcessWhere (const eckit::LocalConfiguration &conf, bool is_in_usererror=false)

Groups	getGroups (const RecursiveSplitter &splitter)

Groups	getMultiElementGroups (const RecursiveSplitter &splitter)

void	orderedComparison (const RecursiveSplitter &splitter, const std::vector< std::vector< int >> &expected)

	CASE ("ufo/RecursiveSplitter/ZeroIds")

	CASE ("ufo/RecursiveSplitter/OneId")

	CASE ("ufo/RecursiveSplitter/TenIds")

	CASE ("ufo/RecursiveSplitter/IntCategories")

	CASE ("ufo/RecursiveSplitter/StringCategories")

	CASE ("ufo/RecursiveSplitter/Recurse")

void	testStuckCheck (const eckit::LocalConfiguration &conf)

void	testTemporalThinning (const eckit::LocalConfiguration &conf)

void	testTrackCheck (const eckit::LocalConfiguration &conf)

const boost::optional< ufo::TrackCheckShipDiagnostics >	setupRunFilter (const eckit::LocalConfiguration &conf, std::vector< size_t > *rejectedObsIndices=nullptr)

void	testTrackCheckShipInitialCalculations (const eckit::LocalConfiguration &conf)

void	testEarlyBreakCondition (const eckit::LocalConfiguration &conf)

void	testRejectedObservations (const eckit::LocalConfiguration &conf)

void	testFirstRejectionSimultaneousIncluded (const eckit::LocalConfiguration &conf)

void	testVariable ()

void	testConstructor ()

bool	hasVariable (const Variables &vars, const Variable &var)

void	testAllFromGroupFor (const std::string &funcName, const eckit::LocalConfiguration &funcConf, const ufo::Variables &initialVars)

void	testAllFromGroup ()

void	testHasGroupFor (const std::string &funcName, const eckit::LocalConfiguration &funcConf, const ufo::Variables &initialVars)

void	testHasGroup ()

Variables
float	missing = util::missingValue(missing)

const char *	expectComputeToThrow = "expect compute to throw exception with message"

const char *	expectConstructorToThrow = "expect constructor to throw exception with message"

const bool	validationSupported = oops::Parameters::isValidationSupported()

Typedef Documentation

◆ Group

typedef std::set<size_t> ufo::test::Group

Definition at line 26 of file test/ufo/RecursiveSplitter.h.

◆ Groups

typedef std::set<Group> ufo::test::Groups

Definition at line 27 of file test/ufo/RecursiveSplitter.h.

◆ ObsPair

typedef std::pair<int, int> ufo::test::ObsPair

Definition at line 35 of file test/ufo/MetOfficeBuddyPairFinder.h.

Function Documentation

◆ CASE() [1/62]

ufo::test::CASE ( "ufo/DataExtractor/bilinearinterp/all_missing" )

Definition at line 214 of file test/ufo/DataExtractor.h.

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◆ CASE() [2/62]

ufo::test::CASE ( "ufo/DataExtractor/bilinearinterp/extrapolation_lower_bound_dim0" )

Definition at line 103 of file test/ufo/DataExtractor.h.

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◆ CASE() [3/62]

ufo::test::CASE ( "ufo/DataExtractor/bilinearinterp/extrapolation_lower_bound_dim1" )

Definition at line 110 of file test/ufo/DataExtractor.h.

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◆ CASE() [4/62]

ufo::test::CASE ( "ufo/DataExtractor/bilinearinterp/extrapolation_upper_bound_dim0" )

Definition at line 117 of file test/ufo/DataExtractor.h.

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◆ CASE() [5/62]

ufo::test::CASE ( "ufo/DataExtractor/bilinearinterp/extrapolation_upper_bound_dim1" )

Definition at line 124 of file test/ufo/DataExtractor.h.

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◆ CASE() [6/62]

ufo::test::CASE ( "ufo/DataExtractor/bilinearinterp/float_blinear" )

Definition at line 95 of file test/ufo/DataExtractor.h.

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◆ CASE() [7/62]

ufo::test::CASE ( "ufo/DataExtractor/bilinearinterp/float_int_dtype" )

Definition at line 145 of file test/ufo/DataExtractor.h.

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◆ CASE() [8/62]

ufo::test::CASE ( "ufo/DataExtractor/bilinearinterp/float_linear" )

Definition at line 71 of file test/ufo/DataExtractor.h.

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◆ CASE() [9/62]

ufo::test::CASE ( "ufo/DataExtractor/bilinearinterp/float_linear_at_lower_boundary_dim0" )

Definition at line 79 of file test/ufo/DataExtractor.h.

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◆ CASE() [10/62]

ufo::test::CASE ( "ufo/DataExtractor/bilinearinterp/float_linear_at_lower_boundary_dim1" )

Definition at line 87 of file test/ufo/DataExtractor.h.

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◆ CASE() [11/62]

ufo::test::CASE ( "ufo/DataExtractor/bilinearinterp/int_float_dtype" )

Definition at line 138 of file test/ufo/DataExtractor.h.

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◆ CASE() [12/62]

ufo::test::CASE ( "ufo/DataExtractor/bilinearinterp/int_int_dtype" )

Definition at line 131 of file test/ufo/DataExtractor.h.

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◆ CASE() [13/62]

ufo::test::CASE ( "ufo/DataExtractor/bilinearinterp/one_missing" )

Definition at line 192 of file test/ufo/DataExtractor.h.

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◆ CASE() [14/62]

ufo::test::CASE ( "ufo/DataExtractor/bilinearinterp/range_constrain" )

Definition at line 251 of file test/ufo/DataExtractor.h.

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◆ CASE() [15/62]

ufo::test::CASE ( "ufo/DataExtractor/bilinearinterp/range_constrain_3D_array" )

Definition at line 285 of file test/ufo/DataExtractor.h.

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◆ CASE() [16/62]

ufo::test::CASE ( "ufo/DataExtractor/bilinearinterp/range_constrain_extrapolation" )

Definition at line 268 of file test/ufo/DataExtractor.h.

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◆ CASE() [17/62]

ufo::test::CASE ( "ufo/DataExtractor/bilinearinterp/string_dtype" )

Definition at line 152 of file test/ufo/DataExtractor.h.

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◆ CASE() [18/62]

ufo::test::CASE ( "ufo/DataExtractor/get1DSlice/not_1d_slice" )

Definition at line 331 of file test/ufo/DataExtractor.h.

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◆ CASE() [19/62]

ufo::test::CASE ( "ufo/DataExtractor/get2DSlice/not_2d_slice" )

Definition at line 319 of file test/ufo/DataExtractor.h.

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◆ CASE() [20/62]

ufo::test::CASE ( "ufo/LinearObsBiasOperator/testLinearObsBiasOperator" )

Definition at line 39 of file test/ufo/LinearObsBiasOperator.h.

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◆ CASE() [21/62]

ufo::test::CASE	(	"ufo/MetOfficeBuddyPairFinder/" "	Duplicates,
		constraints on buddy	counts,
		legacy pair collector"
	)

Definition at line 173 of file test/ufo/MetOfficeBuddyPairFinder.h.

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◆ CASE() [22/62]

ufo::test::CASE ( "ufo/MetOfficeSort/noKey" )

Definition at line 27 of file test/ufo/MetOfficeSort.h.

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◆ CASE() [23/62]

ufo::test::CASE ( "ufo/MetOfficeSort/withKey" )

Definition at line 37 of file test/ufo/MetOfficeSort.h.

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◆ CASE() [24/62]

ufo::test::CASE ( "ufo/OperatorUtils/With 'variables' option" )

Definition at line 77 of file test/ufo/OperatorUtils.h.

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◆ CASE() [25/62]

ufo::test::CASE ( "ufo/OperatorUtils/Without 'variables' option" )

Definition at line 73 of file test/ufo/OperatorUtils.h.

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◆ CASE() [26/62]

ufo::test::CASE ( "ufo/PiecewiseLinearInterpolation/atInterpolationPoints" )

Definition at line 24 of file test/ufo/PiecewiseLinearInterpolation.h.

◆ CASE() [27/62]

ufo::test::CASE ( "ufo/PiecewiseLinearInterpolation/betweenInterpolationPoints" )

Definition at line 32 of file test/ufo/PiecewiseLinearInterpolation.h.

◆ CASE() [28/62]

ufo::test::CASE ( "ufo/PiecewiseLinearInterpolation/differentNumberOfAbscissasAndOrdinates" )

Definition at line 58 of file test/ufo/PiecewiseLinearInterpolation.h.

◆ CASE() [29/62]

ufo::test::CASE ( "ufo/PiecewiseLinearInterpolation/noInterpolationPoints" )

Definition at line 54 of file test/ufo/PiecewiseLinearInterpolation.h.

◆ CASE() [30/62]

ufo::test::CASE ( "ufo/PiecewiseLinearInterpolation/outsideInterpolationPoints" )

Definition at line 39 of file test/ufo/PiecewiseLinearInterpolation.h.

◆ CASE() [31/62]

ufo::test::CASE ( "ufo/PiecewiseLinearInterpolation/singleInterpolationPoint" )

Definition at line 46 of file test/ufo/PiecewiseLinearInterpolation.h.

◆ CASE() [32/62]

ufo::test::CASE	(	"ufo/PoissonDiskThinning/" "Horizontal and time	thinning,
		min spacing larger than nearest neighbor spacing"
	)

Definition at line 151 of file test/ufo/PoissonDiskThinning.h.

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◆ CASE() [33/62]

ufo::test::CASE	(	"ufo/PoissonDiskThinning/" "Horizontal and vertical	thinning,
		min spacing larger than nearest neighbor spacing"
	)

Definition at line 144 of file test/ufo/PoissonDiskThinning.h.

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◆ CASE() [34/62]

ufo::test::CASE	(	"ufo/PoissonDiskThinning/" "Horizontal	thinning,
		min spacing larger than nearest neighbor spacing"
	)

Definition at line 104 of file test/ufo/PoissonDiskThinning.h.

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◆ CASE() [35/62]

ufo::test::CASE	(	"ufo/PoissonDiskThinning/" "Horizontal	thinning,
		min spacing smaller than nearest neighbor spacing"
	)

Definition at line 97 of file test/ufo/PoissonDiskThinning.h.

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◆ CASE() [36/62]

ufo::test::CASE	(	"ufo/PoissonDiskThinning/" "	Horizontal,
		vertical and time	thinning,
		min spacing larger than nearest neighbor spacing"
	)

Definition at line 165 of file test/ufo/PoissonDiskThinning.h.

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◆ CASE() [37/62]

ufo::test::CASE	(	"ufo/PoissonDiskThinning/" "Time	thinning,
		min spacing equal to nearest neighbor spacing"
	)

Definition at line 130 of file test/ufo/PoissonDiskThinning.h.

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◆ CASE() [38/62]

ufo::test::CASE	(	"ufo/PoissonDiskThinning/" "Time	thinning,
		min spacing larger than nearest neighbor spacing"
	)

Definition at line 137 of file test/ufo/PoissonDiskThinning.h.

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◆ CASE() [39/62]

ufo::test::CASE	(	"ufo/PoissonDiskThinning/" "Vertical and time	thinning,
		min spacing larger than nearest neighbor spacing"
	)

Definition at line 158 of file test/ufo/PoissonDiskThinning.h.

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◆ CASE() [40/62]

ufo::test::CASE	(	"ufo/PoissonDiskThinning/" "Vertical	thinning,
		min spacing larger than nearest neighbor spacing"
	)

Definition at line 118 of file test/ufo/PoissonDiskThinning.h.

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◆ CASE() [41/62]

ufo::test::CASE	(	"ufo/PoissonDiskThinning/" "Vertical	thinning,
		min spacing smaller than nearest neighbor spacing"
	)

Definition at line 111 of file test/ufo/PoissonDiskThinning.h.

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◆ CASE() [42/62]

ufo::test::CASE ( "ufo/PoissonDiskThinning/Cylindrical exclusion volumes" )

Definition at line 197 of file test/ufo/PoissonDiskThinning.h.

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◆ CASE() [43/62]

ufo::test::CASE ( "ufo/PoissonDiskThinning/Ellipsoidal exclusion volumes" )

Definition at line 202 of file test/ufo/PoissonDiskThinning.h.

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ufo::test::CASE ( "ufo/PoissonDiskThinning/Incorrectly ordered min horizontal spacings" )

Definition at line 207 of file test/ufo/PoissonDiskThinning.h.

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◆ CASE() [45/62]

ufo::test::CASE ( "ufo/PoissonDiskThinning/Incorrectly ordered min time spacings" )

Definition at line 219 of file test/ufo/PoissonDiskThinning.h.

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◆ CASE() [46/62]

ufo::test::CASE ( "ufo/PoissonDiskThinning/Incorrectly ordered min vertical spacings" )

Definition at line 213 of file test/ufo/PoissonDiskThinning.h.

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◆ CASE() [47/62]

ufo::test::CASE ( "ufo/PoissonDiskThinning/Int-valued categories" )

Definition at line 177 of file test/ufo/PoissonDiskThinning.h.

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◆ CASE() [48/62]

ufo::test::CASE ( "ufo/PoissonDiskThinning/No thinning" )

Definition at line 92 of file test/ufo/PoissonDiskThinning.h.

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◆ CASE() [49/62]

ufo::test::CASE ( "ufo/PoissonDiskThinning/Priorities" )

Definition at line 172 of file test/ufo/PoissonDiskThinning.h.

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◆ CASE() [50/62]

ufo::test::CASE ( "ufo/PoissonDiskThinning/String-valued categories" )

Definition at line 182 of file test/ufo/PoissonDiskThinning.h.

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◆ CASE() [51/62]

ufo::test::CASE ( "ufo/PoissonDiskThinning/Variable min spacings" )

Definition at line 187 of file test/ufo/PoissonDiskThinning.h.

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◆ CASE() [52/62]

ufo::test::CASE	(	"ufo/PoissonDiskThinning/Variable min	spacings,
		shuffling"
	)

Definition at line 192 of file test/ufo/PoissonDiskThinning.h.

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◆ CASE() [53/62]

ufo::test::CASE	(	"ufo/PoissonDiskThinning/Vertical	thinning,
		where clause"
	)

Definition at line 125 of file test/ufo/PoissonDiskThinning.h.

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◆ CASE() [54/62]

ufo::test::CASE ( "ufo/RecursiveSplitter/IntCategories" )

Definition at line 176 of file test/ufo/RecursiveSplitter.h.

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◆ CASE() [55/62]

ufo::test::CASE ( "ufo/RecursiveSplitter/OneId" )

Definition at line 95 of file test/ufo/RecursiveSplitter.h.

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◆ CASE() [56/62]

ufo::test::CASE ( "ufo/RecursiveSplitter/Recurse" )

Definition at line 212 of file test/ufo/RecursiveSplitter.h.

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◆ CASE() [57/62]

ufo::test::CASE ( "ufo/RecursiveSplitter/StringCategories" )

Definition at line 193 of file test/ufo/RecursiveSplitter.h.

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◆ CASE() [58/62]

ufo::test::CASE ( "ufo/RecursiveSplitter/TenIds" )

Definition at line 121 of file test/ufo/RecursiveSplitter.h.

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◆ CASE() [59/62]

ufo::test::CASE ( "ufo/RecursiveSplitter/ZeroIds" )

Definition at line 69 of file test/ufo/RecursiveSplitter.h.

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◆ CASE() [60/62]

ufo::test::CASE	(	"ufo/TemporalThinning/Invariance to	longitude,
		different zonal bands"
	)

Definition at line 247 of file test/ufo/MetOfficeBuddyPairFinder.h.

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◆ CASE() [61/62]

ufo::test::CASE	(	"ufo/TemporalThinning/Invariance to	longitude,
		same zonal band"
	)

Definition at line 253 of file test/ufo/MetOfficeBuddyPairFinder.h.

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◆ CASE() [62/62]

ufo::test::CASE ( "ufo/TemporalThinning/Search radius" )

Definition at line 346 of file test/ufo/MetOfficeBuddyPairFinder.h.

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◆ checkResults() [1/2]

template<typename T >

void ufo::test::checkResults	(	const ioda::ObsSpace &	,
		const eckit::Configuration &	,
		const ioda::ObsDataVector< T > &	vals,
		const ioda::ObsDataVector< T > &	vals_ofd,
		const ioda::ObsDataVector< T > &	ref
	)

Checks that vals and vals_ofd are equal to ref.

Parameters

vals	ObsFunction values calculated by calling ObsFunction::compute() directly.
vals_ofd	ObsFunction values calculated by calling ObsFilterData::get().
ref	Reference values.

Definition at line 93 of file test/ufo/ObsFunction.h.

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◆ checkResults() [2/2]

void ufo::test::checkResults	(	const ioda::ObsSpace &	ospace,
		const eckit::Configuration &	obsfuncconf,
		ioda::ObsDataVector< float > &	vals,
		ioda::ObsDataVector< float > &	vals_ofd,
		const ioda::ObsDataVector< float > &	ref
	)

Specialization for floats: expects the RMSs of the differences between vals and ref and between vals_ofd and ref to be within a specified tolerance.

The contents of vals and vals_ofd are destroyed.

Calculate rms(f(x) - ref) and compare to tolerance

Definition at line 112 of file test/ufo/ObsFunction.h.

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◆ contains()

template<typename T >

bool ufo::test::contains	(	const std::set< T > &	set,
		const T &	element
	)

Definition at line 284 of file test/ufo/MetOfficeBuddyPairFinder.h.

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◆ convertLocalObsIndicesToGlobal()

void ufo::test::convertLocalObsIndicesToGlobal	(	std::vector< size_t > &	indices,
		const std::vector< size_t > &	globalIdxFromLocalIdx
	)

Convert indices of observations held by this process to global observation indices.

Parameters

[in,out]	indices	On input: local indices of observations held by this process. On output: corresponding global observation indices.
	globalIdxFromLocalIdx	A vector whose ith element is the global index of ith observation held by this process.

Definition at line 205 of file ObsFilters.h.

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◆ dataVectorDiff()

void ufo::test::dataVectorDiff	(	const ioda::ObsSpace &	ospace,
		ioda::ObsDataVector< float > &	vals,
		const ioda::ObsDataVector< float > &	ref,
		std::vector< float > &	rms_out,
		size_t &	num_missing_mismatches
	)

Parameters

[out] num_missing_mismatches Number of locations containing a missing value in vals but not in ref, or in ref but not in vals.

Loop through variables and calculate rms for each variable

Definition at line 58 of file test/ufo/ObsFunction.h.

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◆ doTestFunction()

template<typename T >

void ufo::test::doTestFunction	(	ioda::ObsSpace &	ospace,
		const eckit::Configuration &	conf
	)

Get function name

Setup function

Setup ObsFilterData

Setup GeoVaLs

Setup zero ObsBias

Setup ObsDiags

Get output variable names

Compute function result

Compute function result through ObsFilterData

Read reference values from ObsSpace

Definition at line 152 of file test/ufo/ObsFunction.h.

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◆ doTestSerialization()

template<typename ParametersType >

void ufo::test::doTestSerialization ( const eckit::Configuration & config )

Definition at line 37 of file Parameters.h.

◆ duplicatePairsPresent()

bool ufo::test::duplicatePairsPresent ( const std::vector< ObsPair > & pairs )

Definition at line 37 of file test/ufo/MetOfficeBuddyPairFinder.h.

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◆ expectVariablesApproximatelyEqual()

void ufo::test::expectVariablesApproximatelyEqual	(	const ObsTraits::ObsSpace &	obsspace,
		const ufo::Variable &	referenceVariable,
		const ufo::Variable &	testVariable,
		float	absTol
	)

Definition at line 356 of file ObsFilters.h.

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◆ expectVariablesEqual()

template<typename T >

void ufo::test::expectVariablesEqual	(	const ObsTraits::ObsSpace &	obsspace,
		const ufo::Variable &	referenceVariable,
		const ufo::Variable &	testVariable
	)

Definition at line 343 of file ObsFilters.h.

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◆ expectVariablesRelativelyEqual()

void ufo::test::expectVariablesRelativelyEqual	(	const ObsTraits::ObsSpace &	obsspace,
		const ufo::Variable &	referenceVariable,
		const ufo::Variable &	testVariable,
		float	relTol
	)

Definition at line 370 of file ObsFilters.h.

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◆ findBuddyPairs()

std::vector<MetOfficeBuddyPair> ufo::test::findBuddyPairs	(	const MetOfficeBuddyCheckParameters &	options,
		const std::vector< float > &	latitudes,
		const std::vector< float > &	longitudes,
		const std::vector< util::DateTime > &	datetimes,
		const std::vector< float > *	pressures,
		const std::vector< int > &	stationIds,
		const std::vector< size_t > &	validObsIds
	)

Definition at line 181 of file test/ufo/MetOfficeBuddyPairFinder.h.

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◆ findEndpoint() [1/2]

void ufo::test::findEndpoint	(	double	startLat,
		double	startLon,
		double	distance,
		double	bearing,
		double &	endLat,
		double &	endLon
	)

Definition at line 259 of file test/ufo/MetOfficeBuddyPairFinder.h.

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◆ findEndpoint() [2/2]

void ufo::test::findEndpoint	(	float	startLat,
		float	startLon,
		float	distance,
		float	bearing,
		float &	endLat,
		float &	endLon
	)

Definition at line 274 of file test/ufo/MetOfficeBuddyPairFinder.h.

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◆ getFailedObservationIndices()

std::vector<size_t> ufo::test::getFailedObservationIndices	(	const ObsTraits::ObsDataVector< int > &	qcFlags,
		const eckit::mpi::Comm &	comm,
		const std::vector< size_t > &	globalIdxFromLocalIdx
	)

Return the indices of observations that have failed quality control in at least one variable.

Definition at line 276 of file ObsFilters.h.

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◆ getFlaggedObservationIndices()

std::vector<size_t> ufo::test::getFlaggedObservationIndices	(	const ObsTraits::ObsDataVector< int > &	qcFlags,
		const eckit::mpi::Comm &	comm,
		const std::vector< size_t > &	globalIdxFromLocalIdx,
		int	flag
	)

Return the indices of observations whose quality control flag is set to flag in at least one variable.

Definition at line 289 of file ObsFilters.h.

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◆ getGroups()

Groups ufo::test::getGroups ( const RecursiveSplitter & splitter )

Definition at line 29 of file test/ufo/RecursiveSplitter.h.

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◆ getMultiElementGroups()

Groups ufo::test::getMultiElementGroups ( const RecursiveSplitter & splitter )

Definition at line 40 of file test/ufo/RecursiveSplitter.h.

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◆ getObservationIndicesWhere()

template<typename Predicate >

std::vector<size_t> ufo::test::getObservationIndicesWhere	(	const ObsTraits::ObsDataVector< int > &	qcFlags,
		const eckit::mpi::Comm &	comm,
		const std::vector< size_t > &	globalIdxFromLocalIdx,
		const Predicate &	predicate
	)

Return the indices of observations whose quality control flags satisfy the predicate in at least one variable.

Parameters

qcFlags	Vector of quality control flags for all observations.
obsDisttribution	The MPI distribution used by the ObsSpace.
globalIdxFromLocalIdx	A vector whose ith element is the global index of ith observation held by this process.
predicate	A function object taking an argument of type int and returning bool.

Definition at line 227 of file ObsFilters.h.

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◆ getPassedObservationIndices()

std::vector<size_t> ufo::test::getPassedObservationIndices	(	const ObsTraits::ObsDataVector< int > &	qcFlags,
		const eckit::mpi::Comm &	comm,
		const std::vector< size_t > &	globalIdxFromLocalIdx
	)

Return the indices of observations that have passed quality control in at least one variable.

Definition at line 263 of file ObsFilters.h.

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◆ hasVariable()

bool ufo::test::hasVariable	(	const Variables &	vars,
		const Variable &	var
	)

Definition at line 74 of file test/ufo/Variables.h.

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◆ maxNumBuddiesWithSameStationId()

int ufo::test::maxNumBuddiesWithSameStationId	(	const std::vector< ObsPair > &	pairs,
		const std::vector< int > &	stationIds
	)

Definition at line 85 of file test/ufo/MetOfficeBuddyPairFinder.h.

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◆ maxTotalNumBuddies()

int ufo::test::maxTotalNumBuddies ( const std::vector< ObsPair > & pairs )

Definition at line 78 of file test/ufo/MetOfficeBuddyPairFinder.h.

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◆ maxValue()

template<typename Key , typename Value >

Value ufo::test::maxValue ( const std::map< Key, Value > & map )

Definition at line 67 of file test/ufo/MetOfficeBuddyPairFinder.h.

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◆ numEqualTo()

size_t ufo::test::numEqualTo	(	const ObsTraits::ObsDataVector< int > &	data,
		int	value,
		const ioda::Distribution &	dist
	)

Return the number of elements of data equal to value (on all MPI ranks, but counting each location only once even if it is held on multiple ranks).

Definition at line 324 of file ObsFilters.h.

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◆ numNonzero()

size_t ufo::test::numNonzero	(	const ObsTraits::ObsDataVector< int > &	data,
		const ioda::Distribution &	dist
	)

Return the number of nonzero elements of data (on all MPI ranks, but counting each location only once even if it is held on multiple ranks).

Definition at line 303 of file ObsFilters.h.

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◆ orderedComparison()

void ufo::test::orderedComparison	(	const RecursiveSplitter &	splitter,
		const std::vector< std::vector< int >> &	expected
	)

Definition at line 52 of file test/ufo/RecursiveSplitter.h.

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◆ reverse()

ObsPair ufo::test::reverse ( const ObsPair & pair )

Definition at line 288 of file test/ufo/MetOfficeBuddyPairFinder.h.

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◆ run_basic() [1/2]

template<typename T , typename R >

float ufo::test::run_basic	(	const T	obVal0,
		const R	obVal1
	)

Definition at line 64 of file test/ufo/DataExtractor.h.

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◆ run_basic() [2/2]

template<typename T , typename R >

float ufo::test::run_basic	(	const T	obVal0,
		const R	obVal1,
		const std::vector< T > &	varValues0,
		const std::vector< R > &	varValues1
	)

Definition at line 31 of file test/ufo/DataExtractor.h.

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◆ run_missing()

float ufo::test::run_missing	(	const float	obVal0,
		const float	obVal1,
		const std::vector< float >	data
	)

Definition at line 169 of file test/ufo/DataExtractor.h.

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◆ run_range_constrained()

float ufo::test::run_range_constrained	(	const float	obVal0,
		const float	obVal1,
		const std::array< ConstrainedRange, 3 > &	ranges
	)

Definition at line 224 of file test/ufo/DataExtractor.h.

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◆ runFinalCheck()

void ufo::test::runFinalCheck	(	oops::ObsSpace< ufo::ObsTraits > &	obsspace,
		oops::ObsDataVector< ufo::ObsTraits, int > &	qcflags,
		oops::ObsVector< ufo::ObsTraits > &	obserr
	)

Run the FinalCheck filter.

This needs to be done manually if post-filters aren't run because the HofX vector is not available.

Definition at line 185 of file ObsFilters.h.

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◆ runTest()

void ufo::test::runTest ( )

identify parameters used for this group of observations

Definition at line 591 of file ObsFilters.h.

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◆ setupRunFilter()

const boost::optional<ufo::TrackCheckShipDiagnostics> ufo::test::setupRunFilter	(	const eckit::LocalConfiguration &	conf,
		std::vector< size_t > *	rejectedObsIndices = `nullptr`
	)

Definition at line 37 of file test/ufo/TrackCheckShip.h.

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◆ test_locations_lonslats_f90()

int ufo::test::test_locations_lonslats_f90	(	const Locations &	,
		const eckit::Configuration &
	)

similar to LonsLats test, on Fortran level Returns 1 if the test passes, 0 if the test fails

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◆ test_locations_timemask_f90()

int ufo::test::test_locations_timemask_f90	(	const Locations &	,
		const eckit::Configuration &
	)

similar to TimeMask test, on Fortran level Returns 1 if the test passes, 0 if the test fails

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◆ testAllFromGroup()

void ufo::test::testAllFromGroup ( )

Definition at line 101 of file test/ufo/Variables.h.

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◆ testAllFromGroupFor()

void ufo::test::testAllFromGroupFor	(	const std::string &	funcName,
		const eckit::LocalConfiguration &	funcConf,
		const ufo::Variables &	initialVars
	)

Definition at line 85 of file test/ufo/Variables.h.

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◆ testComplexChannels()

void ufo::test::testComplexChannels ( )

Definition at line 113 of file Parameters.h.

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◆ testConcatenate()

void ufo::test::testConcatenate ( )

Tests operator+= (concatenation of two Locations)

test that concatenated longitudes have two copies of original lons

test that concatenated latitudes have two copies of original lats

Definition at line 171 of file test/ufo/Locations.h.

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◆ testConstructor()

void ufo::test::testConstructor ( )

Definition at line 53 of file test/ufo/Variables.h.

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◆ testConventionalProfileProcessing()

void ufo::test::testConventionalProfileProcessing ( const eckit::LocalConfiguration & conf )

Definition at line 59 of file test/ufo/ConventionalProfileProcessing.h.

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◆ testCorrectValue()

void ufo::test::testCorrectValue ( )

Definition at line 78 of file Parameters.h.

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◆ testDefaultValue()

void ufo::test::testDefaultValue ( )

Definition at line 65 of file Parameters.h.

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◆ testDuplicatesAndBuddyCountConstraints()

void ufo::test::testDuplicatesAndBuddyCountConstraints ( const eckit::LocalConfiguration & conf )

Definition at line 94 of file test/ufo/MetOfficeBuddyPairFinder.h.

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◆ testEarlyBreakCondition()

void ufo::test::testEarlyBreakCondition ( const eckit::LocalConfiguration & conf )

Definition at line 131 of file test/ufo/TrackCheckShip.h.

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◆ testFilters()

void ufo::test::testFilters	(	size_t	obsSpaceIndex,
		oops::ObsSpace< ufo::ObsTraits > &	obspace,
		const ObsTypeParameters &	params
	)

init QC and error

call priorFilter and postFilter if hofx is available

initialize zero bias

read GeoVaLs from file if required

read H(x) and ObsDiags from file

read GeoVaLs, compute H(x) and ObsDiags

Only call priorFilter

apply the FinalCheck filter (which should always be run after all other filters).

no need to run priorFilter or postFilter

apply the FinalCheck filter (which should always be run after all other filters).

Definition at line 384 of file ObsFilters.h.

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◆ testFirstRejectionSimultaneousIncluded()

void ufo::test::testFirstRejectionSimultaneousIncluded ( const eckit::LocalConfiguration & conf )

Definition at line 33 of file TrackCheckShipMainLoop.h.

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◆ testFortranLonsLats()

void ufo::test::testFortranLonsLats ( )

Tests Locations accessors lons() and lats() from Fortran.

Definition at line 129 of file test/ufo/Locations.h.

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◆ testFortranTimeMask()

void ufo::test::testFortranTimeMask ( )

Tests Locations::isInTimeWindow method from Fortran.

Definition at line 160 of file test/ufo/Locations.h.

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◆ testFunction()

void ufo::test::testFunction ( )

Use the function group to determine the type of values produced by the function and thus select the right specialization of doTestFunction().

Definition at line 219 of file test/ufo/ObsFunction.h.

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◆ testGaussianThinning()

void ufo::test::testGaussianThinning ( const eckit::LocalConfiguration & conf )

Definition at line 32 of file GaussianThinning.h.

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◆ testGeoVaLs()

void ufo::test::testGeoVaLs ( )

Setup ObsSpace

Setup GeoVaLs

Check that GeoVaLs default constructor works

Check that GeoVaLs constructor to create a GeoVaLs with one location works

Check that GeoVaLs merge followed by a split gives back the original geovals

Check that GeoVaLs & operator *= (const std::vector<float>);

Definition at line 37 of file test/ufo/GeoVaLs.h.

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◆ testGeoVaLsAllocatePutGet()

void ufo::test::testGeoVaLsAllocatePutGet ( )

Tests GeoVaLs::allocate, GeoVals::put, GeoVaLs::get, GeoVaLs::putAtLevel, GeoVaLs::getAtLevel, GeoVaLs::putAtLocation and GeoVaLs::getAtLocation.

Test 2D variables

Setup GeoVaLs that are not filled in or allocated; test that they are not allocated

Allocate only the first variable, and test that it's allocated correctly

Allocate only the second variable (2D variable), test that it's allocated correctly

Set all values for the first level of a 2D variable to an arbitrary number with the put method. Then check that the get method returns the expected values in each case. Do this for several data types. (1) doubles

(2) floats

(3) ints

Check that the getAtLocation method returns what we put in the GeoVaLs. The reference GeoVaLs at indices (jlev, jloc) are equal to jlev + jloc.

Check that the putAtLocation method correctly puts values in the GeoVaLs. This is similar to the previous test but the putting and getting routines are transposed. This is done separately for each data type, using different fill values each time. (1) doubles The reference GeoVaLs at indices (jlev, jloc) are equal to jlev + jloc.

(2) floats The reference GeoVaLs at indices (jlev, jloc) are equal to jlev + jloc + 1.

(3) ints The reference GeoVaLs at indices (jlev, jloc) are equal to jlev + jloc + 2.

Check code paths that throw exceptions for the getAtLocation method.

Check code paths that throw exceptions for the putAtLocation method.

test 3D put and get

Definition at line 173 of file test/ufo/GeoVaLs.h.

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◆ testGeoVaLsConstructor()

void ufo::test::testGeoVaLsConstructor ( )

Tests GeoVaLs(const Locations &, const Variables &, const std::vector<size_t> &) constructor. Tests that levels get correctly allocated, and that the GeoVaLs are zeroed out.

Setup GeoVaLs that are not filled in or allocated; test that they are not allocated

check that get method returns zeroes (initial values in GeoVaLs)

Definition at line 359 of file test/ufo/GeoVaLs.h.

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◆ testHasDtypeAndGet()

template<typename T >

void ufo::test::testHasDtypeAndGet	(	const ufo::ObsFilterData &	data,
		ioda::ObsSpace &	ospace,
		const ufo::Variable &	var,
		ioda::ObsDtype	expectedDtype,
		const std::vector< T > &	expectedValues
	)

Definition at line 34 of file test/ufo/ObsFilterData.h.

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◆ testHasGroup()

void ufo::test::testHasGroup ( )

Definition at line 133 of file test/ufo/Variables.h.

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◆ testHasGroupFor()

void ufo::test::testHasGroupFor	(	const std::string &	funcName,
		const eckit::LocalConfiguration &	funcConf,
		const ufo::Variables &	initialVars
	)

Definition at line 124 of file test/ufo/Variables.h.

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◆ testHistoryCheck()

void ufo::test::testHistoryCheck ( const eckit::LocalConfiguration & conf )

Definition at line 29 of file test/ufo/HistoryCheck.h.

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◆ testInvarianceToLongitude()

void ufo::test::testInvarianceToLongitude ( const eckit::LocalConfiguration & conf )

Definition at line 193 of file test/ufo/MetOfficeBuddyPairFinder.h.

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◆ testLocations()

void ufo::test::testLocations ( )

Tests Locations constructors and method size()

Definition at line 90 of file test/ufo/Locations.h.

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◆ testLonsLats()

void ufo::test::testLonsLats ( )

Tests Locations accessors lons() and lats()

Definition at line 109 of file test/ufo/Locations.h.

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◆ testMetOfficeBuddyCheck()

void ufo::test::testMetOfficeBuddyCheck ( const eckit::LocalConfiguration & conf )

Definition at line 35 of file test/ufo/MetOfficeBuddyCheck.h.

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◆ testMetOfficeRadianceErrorMatrices()

void ufo::test::testMetOfficeRadianceErrorMatrices ( const eckit::LocalConfiguration & conf )

Definition at line 32 of file MetOfficeRadianceErrorMatrices.h.

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◆ testMissingName()

void ufo::test::testMissingName ( )

Definition at line 126 of file Parameters.h.

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◆ testMisspelledProperty()

void ufo::test::testMisspelledProperty ( )

Definition at line 134 of file Parameters.h.

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◆ testNoChannels()

void ufo::test::testNoChannels ( )

Definition at line 101 of file Parameters.h.

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◆ testObsBiasCovarianceDetails()

void ufo::test::testObsBiasCovarianceDetails ( )

Definition at line 33 of file ObsBiasCovarianceDetails.h.

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◆ testObsBiasReadWrite()

void ufo::test::testObsBiasReadWrite ( )

Tests ObsBias::read and ObsBias::write methods.

Test that if we write and then read or initialize ObsBias the coefficients are correct for the read/initialized ObsBias.

Definition at line 34 of file test/ufo/ObsBias.h.

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◆ testObsDiagnostics()

void ufo::test::testObsDiagnostics ( )

Definition at line 44 of file test/ufo/ObsDiagnostics.h.

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◆ testObsErrorAssign()

void ufo::test::testObsErrorAssign ( const eckit::LocalConfiguration & conf )

Definition at line 32 of file ObsErrorAssign.h.

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◆ testObsFilterData()

void ufo::test::testObsFilterData ( )

Setup ObsSpace

Setup GeoVaLs

Setup ObsDiags

Setup H(x)

Setup ObsErrors

Setup QCFlags

Setup ObsFilterData and test nlocs

Check that has(), get() and dtype() works on ObsSpace:

Check that has(), get() and dtype() work on integer variables in ObsSpace:

Check that has(), get() and dtype() work on string variables in ObsSpace:

Check that has(), get() and dtype() work on datetime variables in ObsSpace:

Check that associate(), has(), get() and dtype() work on ObsVector: H(x) not associated yet The important aspect of dtype handling here is it not being in ObsSpace so we needn't test for other containers.

H(x) associated now

Check that associate(), has(), get() and dtype() work on ObsDataVector<float>:

ObsErrorData associated now

Check that associate(), has(), get() and dtype() work on ObsDataVector<int>:

QCFlags associated now

Check that associate(), has() and get() work on GeoVaLs: GeoVaLs not associated yet

GeoVaLs associated now

nlevs == 1: 2D geovals, could be retrieved with get(var)

otherwise need get(var, level) to retrieve

Check that associate(), has() and get() work on ObsDiags: ObsDiags not associated yet

ObsDiags associated now

nlevs == 1: 2D obsdiags, could be retrieved with get(var)

otherwise need get(var, level) to retrieve

Definition at line 58 of file test/ufo/ObsFilterData.h.

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◆ testOperatorUtils()

void ufo::test::testOperatorUtils ( const eckit::LocalConfiguration & conf )

Definition at line 58 of file test/ufo/OperatorUtils.h.

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◆ testPoissonDiskThinning()

void ufo::test::testPoissonDiskThinning	(	const eckit::LocalConfiguration &	conf,
		bool	expectValidationError = `false`
	)

Definition at line 44 of file ParallelPoissonDiskThinning.h.

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◆ testPredictor()

void ufo::test::testPredictor ( )

For each predictor for each variable compare computed predictor values to reference

Definition at line 39 of file Predictor.h.

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◆ testPrimitiveVariables()

void ufo::test::testPrimitiveVariables ( const eckit::LocalConfiguration & conf )

Test a range-based for loop over the PrimitiveVariables range.

Definition at line 81 of file test/ufo/PrimitiveVariables.h.

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◆ testPrimitiveVariablesIterator()

void ufo::test::testPrimitiveVariablesIterator ( const eckit::LocalConfiguration & conf )

Test explicitly that the * and -> operator overloads in PrimitiveVariablesIterator work correctly.

Definition at line 117 of file test/ufo/PrimitiveVariables.h.

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◆ testProcessWhere()

void ufo::test::testProcessWhere	(	const eckit::LocalConfiguration &	conf,
		bool	is_in_usererror = `false`
	)

Definition at line 43 of file test/ufo/processWhere.h.

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◆ testRejectedObservations()

void ufo::test::testRejectedObservations ( const eckit::LocalConfiguration & conf )

Definition at line 150 of file test/ufo/TrackCheckShip.h.

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◆ testSearchRadius()

void ufo::test::testSearchRadius ( const eckit::LocalConfiguration & conf )

Definition at line 292 of file test/ufo/MetOfficeBuddyPairFinder.h.

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◆ testSerializationWithChannels()

void ufo::test::testSerializationWithChannels ( )

Definition at line 141 of file Parameters.h.

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◆ testSerializationWithoutChannels()

void ufo::test::testSerializationWithoutChannels ( )

Definition at line 147 of file Parameters.h.

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◆ testSimpleString()

void ufo::test::testSimpleString ( )

Definition at line 90 of file Parameters.h.

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◆ testStuckCheck()

void ufo::test::testStuckCheck ( const eckit::LocalConfiguration & conf )

Definition at line 32 of file test/ufo/StuckCheck.h.

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◆ testTemporalThinning()

void ufo::test::testTemporalThinning ( const eckit::LocalConfiguration & conf )

Definition at line 32 of file test/ufo/TemporalThinning.h.

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◆ testTimeMask()

void ufo::test::testTimeMask ( )

Tests Locations::isInTimeWindow method.

Definition at line 140 of file test/ufo/Locations.h.

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◆ testTrackCheck()

void ufo::test::testTrackCheck ( const eckit::LocalConfiguration & conf )

Definition at line 32 of file test/ufo/TrackCheck.h.

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◆ testTrackCheckShipInitialCalculations()

void ufo::test::testTrackCheckShipInitialCalculations ( const eckit::LocalConfiguration & conf )

Definition at line 73 of file test/ufo/TrackCheckShip.h.

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◆ testVariable()

void ufo::test::testVariable ( )

Definition at line 31 of file test/ufo/Variables.h.

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Variable Documentation

◆ expectComputeToThrow

const char* ufo::test::expectComputeToThrow = "expect compute to throw exception with message"

Definition at line 50 of file test/ufo/ObsFunction.h.

◆ expectConstructorToThrow

const char* ufo::test::expectConstructorToThrow = "expect constructor to throw exception with message"

Definition at line 51 of file test/ufo/ObsFunction.h.

◆ missing

float ufo::test::missing = util::missingValue(missing)

Definition at line 27 of file test/ufo/DataExtractor.h.

◆ validationSupported

const bool ufo::test::validationSupported = oops::Parameters::isValidationSupported()

Definition at line 28 of file Parameters.h.

Classes

Typedefs

Functions

Variables

Typedef Documentation

◆ Group

◆ Groups

◆ ObsPair

Function Documentation

◆ CASE() [1/62]

◆ CASE() [2/62]

◆ CASE() [3/62]

◆ CASE() [4/62]

◆ CASE() [5/62]

◆ CASE() [6/62]

◆ CASE() [7/62]

◆ CASE() [8/62]

◆ CASE() [9/62]

◆ CASE() [10/62]

◆ CASE() [11/62]

◆ CASE() [12/62]

◆ CASE() [13/62]

◆ CASE() [14/62]

◆ CASE() [15/62]

◆ CASE() [16/62]

◆ CASE() [17/62]

◆ CASE() [18/62]

◆ CASE() [19/62]

◆ CASE() [20/62]

◆ CASE() [21/62]

◆ CASE() [22/62]

◆ CASE() [23/62]

◆ CASE() [24/62]

◆ CASE() [25/62]

◆ CASE() [26/62]

◆ CASE() [27/62]

◆ CASE() [28/62]

◆ CASE() [29/62]

◆ CASE() [30/62]

◆ CASE() [31/62]

◆ CASE() [32/62]

◆ CASE() [33/62]

◆ CASE() [34/62]

◆ CASE() [35/62]

◆ CASE() [36/62]

◆ CASE() [37/62]

◆ CASE() [38/62]

◆ CASE() [39/62]

◆ CASE() [40/62]

◆ CASE() [41/62]

◆ CASE() [42/62]

◆ CASE() [43/62]

◆ CASE() [44/62]

◆ CASE() [45/62]

◆ CASE() [46/62]

◆ CASE() [47/62]

◆ CASE() [48/62]

◆ CASE() [49/62]

◆ CASE() [50/62]

◆ CASE() [51/62]

◆ CASE() [52/62]

◆ CASE() [53/62]

◆ CASE() [54/62]

◆ CASE() [55/62]

◆ CASE() [56/62]

◆ CASE() [57/62]

◆ CASE() [58/62]

◆ CASE() [59/62]

◆ CASE() [60/62]

◆ CASE() [61/62]

◆ CASE() [62/62]

◆ checkResults() [1/2]

◆ checkResults() [2/2]

◆ contains()

◆ convertLocalObsIndicesToGlobal()

◆ dataVectorDiff()

◆ doTestFunction()

◆ doTestSerialization()

◆ duplicatePairsPresent()

◆ expectVariablesApproximatelyEqual()