test/ioda/ObsDataVector.h

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/*
 * (C) Copyright 2021 Met Office UK
 *
 * This software is licensed under the terms of the Apache Licence Version 2.0
 * which can be obtained at http://www.apache.org/licenses/LICENSE-2.0.
 */
 
#ifndef TEST_IODA_OBSDATAVECTOR_H_
#define TEST_IODA_OBSDATAVECTOR_H_
 
#include <memory>
#include <string>
#include <vector>
 
#include <boost/make_unique.hpp>
 
#include "eckit/config/LocalConfiguration.h"
#include "eckit/testing/Test.h"
 
#include "oops/mpi/mpi.h"
#include "oops/runs/Test.h"
#include "oops/test/TestEnvironment.h"
 
#include "ioda/ObsDataVector.h"
#include "ioda/ObsSpace.h"
 
namespace ioda {
namespace test {
 
class ObsDataVecTestFixture : private boost::noncopyable {
  typedef ioda::ObsSpace ObsSpace_;
 
 public:
  static ObsSpace_ & obspace() {return *getInstance().obspace_;}
 
 private:
  static ObsDataVecTestFixture& getInstance() {
    static ObsDataVecTestFixture theObsDataVecTestFixture;
    return theObsDataVecTestFixture;
  }
 
  ObsDataVecTestFixture() {
    const eckit::Configuration &conf = ::test::TestEnvironment::config();
    const util::DateTime bgn(conf.getString("window begin"));
    const util::DateTime end(conf.getString("window end"));
 
    eckit::LocalConfiguration obsconf(conf, "obs space");
    ioda::ObsTopLevelParameters obsparams;
    obsparams.validateAndDeserialize(obsconf);
    obspace_ = boost::make_unique<ObsSpace_>(obsparams, oops::mpi::world(),
                                             bgn, end, oops::mpi::myself());
  }
 
  std::unique_ptr<ObsSpace_> obspace_;
};
 
std::string trim(const std::string & str) {
  const auto strBegin = str.find_first_not_of("\n");
  if (strBegin == std::string::npos) return "";
  const auto strEnd = str.find_last_not_of("\n");
  const auto strRange = strEnd - strBegin + 1;
  return str.substr(strBegin, strRange);
}
 
 
template <typename T>
void testPrint(const std::string &datatype) {
  eckit::LocalConfiguration conf(::test::TestEnvironment::config(), "print." + datatype);
 
  oops::Variables vars;
  for (const std::string &var : conf.getStringVector("variables"))
    vars.push_back(var);
  const std::string group = conf.getString("group");
  ioda::ObsDataVector<T> vector(ObsDataVecTestFixture::obspace(), vars, group);
 
  std::stringstream stream;
  stream << vector;
  std::string output = trim(stream.str());
  std::string expectedOutput = trim(conf.getString("expected output"));
  EXPECT_EQUAL(output, expectedOutput);
}
 
CASE("ioda/ObsDataVector/printFloat") {
  testPrint<float>("float");
}
 
CASE("ioda/ObsDataVector/printDouble") {
  testPrint<double>("double");
}
 
CASE("ioda/ObsDataVector/printInt") {
  testPrint<int>("int");
}
 
CASE("ioda/ObsDataVector/printString") {
  testPrint<std::string>("string");
}
 
CASE("ioda/ObsDataVector/printDateTime") {
  testPrint<util::DateTime>("datetime");
}
 
CASE("ioda/ObsDataVector/closeObsSpace") {
  // In case the obsdataout spec is ever used
  ObsDataVecTestFixture::obspace().save();
}
 
class ObsDataVector : public oops::Test {
 private:
  std::string testid() const override {return "test::ObsDataVector<ioda::IodaTrait>";}
 
  void register_tests() const override {}
 
  void clear() const override {}
};
 
// =============================================================================
 
}  // namespace test
}  // namespace ioda
 
#endif  // TEST_IODA_OBSDATAVECTOR_H_