JEDI_conv_bufr2nc_2D Namespace Reference

Functions
def	append_nc_createvar (min_ind, bufr_str, dim_flag)
	functions More...
def	bufr2nc_record (min_ind, bufr_str, n_subset)
def	bufr2nc_record2D (min_ind1, min_ind2, bufr_str, n_subset)
def	bufr2nc_record_bevn (min_ind2, min_ind3, bufr_str, n_subset)

Variables
string	prepbufr_filename = 'prepbufr.gdas.2016030406'
string	netcdf_filename = 'test.nc'
	hdstr = np.array(['SID','XOB','YOB','DHR','TYP','ELV','SAID','T29'])
	from read_prepbufr.f90 More...
	misc = np.array(['TSB','PRVSTG','SPRVSTG','ACID'])
	obstr = np.array(['POB','QOB','TOB','ZOB','UOB','VOB','PWO','MXGS','HOVI','CAT','PRSS','TDO','PMO' ])
	satqcstr = np.array(['QIFN'])
	drift = np.array(['XDR','YDR','HRDR'])
	fcststr = np.array(['UFC','VFC','TFC'])
	qcstr = np.array(['PQM','QQM','TQM','ZQM','WQM','NUL','PWQ','PMQ'])
	oestr = np.array(['POE','QOE','TOE','NUL','WOE','NUL','PWE'])
	aircraftstr = np.array(['POAF','IALR'])
	bevnstr = np.array(['TPC','TOB','TQM'])
list	sststr = ['MSST','DBSS','SST1','SSTQM','SSTOE']
list	prvstr = ['PRVSTG']
list	sprvstr = ['SPRVSTG']
list	levstr = ['POB']
list	cld2seqstr = ['TOCC','HBLCS']
list	cldseqstr = ['VSSO','CLAM','HOCB']
list	metarcldstr = ['CLAM','HOCB']
list	metarwthstr = ['PRWE']
list	metarvisstr = ['HOVI','TDO']
list	goescldstr = ['CDTP','TOCC','GCDTT','CDTP_QM']
list	maxtmintstr = ['MXTM','MITM']
list	owavestr = ['HOWV']
list	cldceilhstr = ['CEILING']
	hdr_ind_out = np.arange(8)
	INDEXES TO BE READ IN FROM EACH STRING ABOVE. More...
	msc_ind_out = np.arange(4)
	obs_ind_out = np.arange(13)
	sqc_ind_out = np.array([0])
	drf_ind_out = np.arange(3)
	fcs_ind_out = np.arange(3)
	qcs_ind_out = np.array([0,1,2,3,4,6,7])
	oes_ind_out = np.array([0,1,2,4,6])
	bev_ind_out = np.array([0])
	air_ind_out = np.arange(2)
	nc = Dataset(netcdf_filename,'w',format='NETCDF4')
	SET UP THE NC FILE. More...
	nobs_dim = nc.createDimension('nobs',None)
	nobs_diag_dim = nc.createDimension('nobs_diag',None)
	plev_diag_dim = nc.createDimension('max_plev',None)
	bevn_layr_dim = nc.createDimension('bevn_layer',None)
	mtyp_string_dim = nc.createDimension('mtyp_string_len',10)
list	nc_varh = []
int	next_ind = 2
int	min_ind_hdr = append_nc_createvar(next_ind,hdstr[hdr_ind_out],0)
int	min_ind_msc = append_nc_createvar(next_ind,misc[msc_ind_out],0)
int	min_ind_sqc = append_nc_createvar(next_ind,satqcstr[sqc_ind_out],0)
int	min_ind_obs2 = append_nc_createvar(next_ind,obstr[obs_ind_out],2)
int	min_ind_drf2 = append_nc_createvar(next_ind,drift[drf_ind_out],2)
int	min_ind_fcs2 = append_nc_createvar(next_ind,fcststr[fcs_ind_out],2)
int	min_ind_qcs2 = append_nc_createvar(next_ind,qcstr[qcs_ind_out],2)
int	min_ind_oes2 = append_nc_createvar(next_ind,oestr[oes_ind_out],2)
int	min_ind_air2 = append_nc_createvar(next_ind,aircraftstr[air_ind_out],2)
int	min_ind_obs1 = append_nc_createvar(next_ind,obstr[obs_ind_out],1)
int	min_ind_drf1 = append_nc_createvar(next_ind,drift[drf_ind_out],1)
int	min_ind_fcs1 = append_nc_createvar(next_ind,fcststr[fcs_ind_out],1)
int	min_ind_qcs1 = append_nc_createvar(next_ind,qcstr[qcs_ind_out],1)
int	min_ind_oes1 = append_nc_createvar(next_ind,oestr[oes_ind_out],1)
int	min_ind_air1 = append_nc_createvar(next_ind,aircraftstr[air_ind_out],1)
int	min_ind_bev3 = append_nc_createvar(next_ind,bevnstr[bev_ind_out],3)
int	min_ind_bev2 = append_nc_createvar(next_ind,bevnstr[bev_ind_out],4)
	bufr = ncepbufr.open(prepbufr_filename )
int	n_subset = 0
int	n_msg_excl = 0
list	nlev_msg = []
list	type_msg = []
	tmp_str = bufr.msg_type
def	nlev = bufr2nc_record2D(min_ind_obs1, min_ind_obs2, obstr[obs_ind_out],n_subset)
	virtmp_code

Detailed Description

convert prepbufr file to netCDF
cdraper, Nov, 2017

Function Documentation

append_nc_createvar()

def JEDI_conv_bufr2nc_2D.append_nc_createvar	(		min_ind,
			bufr_str,
			dim_flag
	)

functions

Definition at line 29 of file JEDI_conv_bufr2nc_2D.py.

bufr2nc_record()

def JEDI_conv_bufr2nc_2D.bufr2nc_record	(		min_ind,
			bufr_str,
			n_subset
	)

Definition at line 46 of file JEDI_conv_bufr2nc_2D.py.

bufr2nc_record2D()

def JEDI_conv_bufr2nc_2D.bufr2nc_record2D	(		min_ind1,
			min_ind2,
			bufr_str,
			n_subset
	)

Definition at line 54 of file JEDI_conv_bufr2nc_2D.py.

bufr2nc_record_bevn()

def JEDI_conv_bufr2nc_2D.bufr2nc_record_bevn	(		min_ind2,
			min_ind3,
			bufr_str,
			n_subset
	)

Definition at line 71 of file JEDI_conv_bufr2nc_2D.py.

Variable Documentation

air_ind_out

JEDI_conv_bufr2nc_2D.air_ind_out = np.arange(2)

Definition at line 134 of file JEDI_conv_bufr2nc_2D.py.

aircraftstr

JEDI_conv_bufr2nc_2D.aircraftstr = np.array(['POAF','IALR'])

Definition at line 103 of file JEDI_conv_bufr2nc_2D.py.

bev_ind_out

JEDI_conv_bufr2nc_2D.bev_ind_out = np.array([0])

Definition at line 133 of file JEDI_conv_bufr2nc_2D.py.

bevn_layr_dim

JEDI_conv_bufr2nc_2D.bevn_layr_dim = nc.createDimension('bevn_layer',None)

Definition at line 146 of file JEDI_conv_bufr2nc_2D.py.

bevnstr

JEDI_conv_bufr2nc_2D.bevnstr = np.array(['TPC','TOB','TQM'])

Definition at line 104 of file JEDI_conv_bufr2nc_2D.py.

bufr

JEDI_conv_bufr2nc_2D.bufr = ncepbufr.open(prepbufr_filename )

Definition at line 183 of file JEDI_conv_bufr2nc_2D.py.

cld2seqstr

list JEDI_conv_bufr2nc_2D.cld2seqstr = ['TOCC','HBLCS']

Definition at line 110 of file JEDI_conv_bufr2nc_2D.py.

cldceilhstr

list JEDI_conv_bufr2nc_2D.cldceilhstr = ['CEILING']

Definition at line 118 of file JEDI_conv_bufr2nc_2D.py.

cldseqstr

list JEDI_conv_bufr2nc_2D.cldseqstr = ['VSSO','CLAM','HOCB']

Definition at line 111 of file JEDI_conv_bufr2nc_2D.py.

drf_ind_out

JEDI_conv_bufr2nc_2D.drf_ind_out = np.arange(3)

Definition at line 129 of file JEDI_conv_bufr2nc_2D.py.

drift

JEDI_conv_bufr2nc_2D.drift = np.array(['XDR','YDR','HRDR'])

Definition at line 99 of file JEDI_conv_bufr2nc_2D.py.

fcs_ind_out

JEDI_conv_bufr2nc_2D.fcs_ind_out = np.arange(3)

Definition at line 130 of file JEDI_conv_bufr2nc_2D.py.

fcststr

JEDI_conv_bufr2nc_2D.fcststr = np.array(['UFC','VFC','TFC'])

Definition at line 100 of file JEDI_conv_bufr2nc_2D.py.

goescldstr

list JEDI_conv_bufr2nc_2D.goescldstr = ['CDTP','TOCC','GCDTT','CDTP_QM']

Definition at line 115 of file JEDI_conv_bufr2nc_2D.py.

hdr_ind_out

JEDI_conv_bufr2nc_2D.hdr_ind_out = np.arange(8)

INDEXES TO BE READ IN FROM EACH STRING ABOVE.

Definition at line 124 of file JEDI_conv_bufr2nc_2D.py.

hdstr

JEDI_conv_bufr2nc_2D.hdstr = np.array(['SID','XOB','YOB','DHR','TYP','ELV','SAID','T29'])

from read_prepbufr.f90

Definition at line 95 of file JEDI_conv_bufr2nc_2D.py.

levstr

list JEDI_conv_bufr2nc_2D.levstr = ['POB']

Definition at line 109 of file JEDI_conv_bufr2nc_2D.py.

maxtmintstr

list JEDI_conv_bufr2nc_2D.maxtmintstr = ['MXTM','MITM']

Definition at line 116 of file JEDI_conv_bufr2nc_2D.py.

metarcldstr

list JEDI_conv_bufr2nc_2D.metarcldstr = ['CLAM','HOCB']

Definition at line 112 of file JEDI_conv_bufr2nc_2D.py.

metarvisstr

list JEDI_conv_bufr2nc_2D.metarvisstr = ['HOVI','TDO']

Definition at line 114 of file JEDI_conv_bufr2nc_2D.py.

metarwthstr

list JEDI_conv_bufr2nc_2D.metarwthstr = ['PRWE']

Definition at line 113 of file JEDI_conv_bufr2nc_2D.py.

min_ind_air1

int JEDI_conv_bufr2nc_2D.min_ind_air1 = append_nc_createvar(next_ind,aircraftstr[air_ind_out],1)

Definition at line 175 of file JEDI_conv_bufr2nc_2D.py.

min_ind_air2

int JEDI_conv_bufr2nc_2D.min_ind_air2 = append_nc_createvar(next_ind,aircraftstr[air_ind_out],2)

Definition at line 167 of file JEDI_conv_bufr2nc_2D.py.

min_ind_bev2

int JEDI_conv_bufr2nc_2D.min_ind_bev2 = append_nc_createvar(next_ind,bevnstr[bev_ind_out],4)

Definition at line 181 of file JEDI_conv_bufr2nc_2D.py.

min_ind_bev3

int JEDI_conv_bufr2nc_2D.min_ind_bev3 = append_nc_createvar(next_ind,bevnstr[bev_ind_out],3)

Definition at line 178 of file JEDI_conv_bufr2nc_2D.py.

min_ind_drf1

int JEDI_conv_bufr2nc_2D.min_ind_drf1 = append_nc_createvar(next_ind,drift[drf_ind_out],1)

Definition at line 171 of file JEDI_conv_bufr2nc_2D.py.

min_ind_drf2

int JEDI_conv_bufr2nc_2D.min_ind_drf2 = append_nc_createvar(next_ind,drift[drf_ind_out],2)

Definition at line 163 of file JEDI_conv_bufr2nc_2D.py.

min_ind_fcs1

int JEDI_conv_bufr2nc_2D.min_ind_fcs1 = append_nc_createvar(next_ind,fcststr[fcs_ind_out],1)

Definition at line 172 of file JEDI_conv_bufr2nc_2D.py.

min_ind_fcs2

int JEDI_conv_bufr2nc_2D.min_ind_fcs2 = append_nc_createvar(next_ind,fcststr[fcs_ind_out],2)

Definition at line 164 of file JEDI_conv_bufr2nc_2D.py.

min_ind_hdr

int JEDI_conv_bufr2nc_2D.min_ind_hdr = append_nc_createvar(next_ind,hdstr[hdr_ind_out],0)

Definition at line 157 of file JEDI_conv_bufr2nc_2D.py.

min_ind_msc

int JEDI_conv_bufr2nc_2D.min_ind_msc = append_nc_createvar(next_ind,misc[msc_ind_out],0)

Definition at line 158 of file JEDI_conv_bufr2nc_2D.py.

min_ind_obs1

int JEDI_conv_bufr2nc_2D.min_ind_obs1 = append_nc_createvar(next_ind,obstr[obs_ind_out],1)

Definition at line 170 of file JEDI_conv_bufr2nc_2D.py.

min_ind_obs2

int JEDI_conv_bufr2nc_2D.min_ind_obs2 = append_nc_createvar(next_ind,obstr[obs_ind_out],2)

Definition at line 162 of file JEDI_conv_bufr2nc_2D.py.

min_ind_oes1

int JEDI_conv_bufr2nc_2D.min_ind_oes1 = append_nc_createvar(next_ind,oestr[oes_ind_out],1)

Definition at line 174 of file JEDI_conv_bufr2nc_2D.py.

min_ind_oes2

int JEDI_conv_bufr2nc_2D.min_ind_oes2 = append_nc_createvar(next_ind,oestr[oes_ind_out],2)

Definition at line 166 of file JEDI_conv_bufr2nc_2D.py.

min_ind_qcs1

int JEDI_conv_bufr2nc_2D.min_ind_qcs1 = append_nc_createvar(next_ind,qcstr[qcs_ind_out],1)

Definition at line 173 of file JEDI_conv_bufr2nc_2D.py.

min_ind_qcs2

int JEDI_conv_bufr2nc_2D.min_ind_qcs2 = append_nc_createvar(next_ind,qcstr[qcs_ind_out],2)

Definition at line 165 of file JEDI_conv_bufr2nc_2D.py.

min_ind_sqc

int JEDI_conv_bufr2nc_2D.min_ind_sqc = append_nc_createvar(next_ind,satqcstr[sqc_ind_out],0)

Definition at line 159 of file JEDI_conv_bufr2nc_2D.py.

misc

JEDI_conv_bufr2nc_2D.misc = np.array(['TSB','PRVSTG','SPRVSTG','ACID'])

Definition at line 96 of file JEDI_conv_bufr2nc_2D.py.

msc_ind_out

JEDI_conv_bufr2nc_2D.msc_ind_out = np.arange(4)

Definition at line 125 of file JEDI_conv_bufr2nc_2D.py.

mtyp_string_dim

JEDI_conv_bufr2nc_2D.mtyp_string_dim = nc.createDimension('mtyp_string_len',10)

Definition at line 147 of file JEDI_conv_bufr2nc_2D.py.

n_msg_excl

int JEDI_conv_bufr2nc_2D.n_msg_excl = 0

Definition at line 188 of file JEDI_conv_bufr2nc_2D.py.

n_subset

int JEDI_conv_bufr2nc_2D.n_subset = 0

Definition at line 187 of file JEDI_conv_bufr2nc_2D.py.

nc

JEDI_conv_bufr2nc_2D.nc = Dataset(netcdf_filename,'w',format='NETCDF4')

SET UP THE NC FILE.

Definition at line 140 of file JEDI_conv_bufr2nc_2D.py.

nc_varh

list JEDI_conv_bufr2nc_2D.nc_varh = []

Definition at line 150 of file JEDI_conv_bufr2nc_2D.py.

netcdf_filename

string JEDI_conv_bufr2nc_2D.netcdf_filename = 'test.nc'

Definition at line 24 of file JEDI_conv_bufr2nc_2D.py.

next_ind

int JEDI_conv_bufr2nc_2D.next_ind = 2

Definition at line 156 of file JEDI_conv_bufr2nc_2D.py.

nlev

def JEDI_conv_bufr2nc_2D.nlev = bufr2nc_record2D(min_ind_obs1, min_ind_obs2, obstr[obs_ind_out],n_subset)

Definition at line 227 of file JEDI_conv_bufr2nc_2D.py.

nlev_msg

list JEDI_conv_bufr2nc_2D.nlev_msg = []

Definition at line 191 of file JEDI_conv_bufr2nc_2D.py.

nobs_diag_dim

JEDI_conv_bufr2nc_2D.nobs_diag_dim = nc.createDimension('nobs_diag',None)

Definition at line 144 of file JEDI_conv_bufr2nc_2D.py.

nobs_dim

JEDI_conv_bufr2nc_2D.nobs_dim = nc.createDimension('nobs',None)

Definition at line 143 of file JEDI_conv_bufr2nc_2D.py.

obs_ind_out

JEDI_conv_bufr2nc_2D.obs_ind_out = np.arange(13)

Definition at line 127 of file JEDI_conv_bufr2nc_2D.py.

obstr

JEDI_conv_bufr2nc_2D.obstr = np.array(['POB','QOB','TOB','ZOB','UOB','VOB','PWO','MXGS','HOVI','CAT','PRSS','TDO','PMO' ])

Definition at line 97 of file JEDI_conv_bufr2nc_2D.py.

oes_ind_out

JEDI_conv_bufr2nc_2D.oes_ind_out = np.array([0,1,2,4,6])

Definition at line 132 of file JEDI_conv_bufr2nc_2D.py.

oestr

JEDI_conv_bufr2nc_2D.oestr = np.array(['POE','QOE','TOE','NUL','WOE','NUL','PWE'])

Definition at line 102 of file JEDI_conv_bufr2nc_2D.py.

owavestr

list JEDI_conv_bufr2nc_2D.owavestr = ['HOWV']

Definition at line 117 of file JEDI_conv_bufr2nc_2D.py.

plev_diag_dim

JEDI_conv_bufr2nc_2D.plev_diag_dim = nc.createDimension('max_plev',None)

Definition at line 145 of file JEDI_conv_bufr2nc_2D.py.

prepbufr_filename

string JEDI_conv_bufr2nc_2D.prepbufr_filename = 'prepbufr.gdas.2016030406'

Definition at line 23 of file JEDI_conv_bufr2nc_2D.py.

prvstr

list JEDI_conv_bufr2nc_2D.prvstr = ['PRVSTG']

Definition at line 107 of file JEDI_conv_bufr2nc_2D.py.

qcs_ind_out

JEDI_conv_bufr2nc_2D.qcs_ind_out = np.array([0,1,2,3,4,6,7])

Definition at line 131 of file JEDI_conv_bufr2nc_2D.py.

qcstr

JEDI_conv_bufr2nc_2D.qcstr = np.array(['PQM','QQM','TQM','ZQM','WQM','NUL','PWQ','PMQ'])

Definition at line 101 of file JEDI_conv_bufr2nc_2D.py.

satqcstr

JEDI_conv_bufr2nc_2D.satqcstr = np.array(['QIFN'])

Definition at line 98 of file JEDI_conv_bufr2nc_2D.py.

sprvstr

list JEDI_conv_bufr2nc_2D.sprvstr = ['SPRVSTG']

Definition at line 108 of file JEDI_conv_bufr2nc_2D.py.

sqc_ind_out

JEDI_conv_bufr2nc_2D.sqc_ind_out = np.array([0])

Definition at line 128 of file JEDI_conv_bufr2nc_2D.py.

sststr

list JEDI_conv_bufr2nc_2D.sststr = ['MSST','DBSS','SST1','SSTQM','SSTOE']

Definition at line 106 of file JEDI_conv_bufr2nc_2D.py.

tmp_str

JEDI_conv_bufr2nc_2D.tmp_str = bufr.msg_type

Definition at line 197 of file JEDI_conv_bufr2nc_2D.py.

type_msg

list JEDI_conv_bufr2nc_2D.type_msg = []

Definition at line 192 of file JEDI_conv_bufr2nc_2D.py.

virtmp_code

JEDI_conv_bufr2nc_2D.virtmp_code

Definition at line 241 of file JEDI_conv_bufr2nc_2D.py.