#include <BayesianBackgroundQCFlags.h>

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Public Types
typedef BayesianBackgroundQCFlagsParameters	Parameters_

Public Member Functions
	BayesianBackgroundQCFlags (ioda::ObsSpace &, const Parameters_ &, std::shared_ptr< ioda::ObsDataVector< int > >, std::shared_ptr< ioda::ObsDataVector< float > >)

	~BayesianBackgroundQCFlags ()

Public Member Functions inherited from ufo::FilterBase
	FilterBase (ioda::ObsSpace &, const FilterParametersBaseWithAbstractAction &parameters, std::shared_ptr< ioda::ObsDataVector< int > >, std::shared_ptr< ioda::ObsDataVector< float > >)

	FilterBase (ioda::ObsSpace &, const eckit::Configuration &, std::shared_ptr< ioda::ObsDataVector< int > >, std::shared_ptr< ioda::ObsDataVector< float > >)

	~FilterBase ()

Public Member Functions inherited from ufo::ObsProcessorBase
	ObsProcessorBase (ioda::ObsSpace &, bool deferToPost, std::shared_ptr< ioda::ObsDataVector< int > >, std::shared_ptr< ioda::ObsDataVector< float > >)

	~ObsProcessorBase ()

void	preProcess () override

void	priorFilter (const GeoVaLs &) override

void	postFilter (const ioda::ObsVector &, const ioda::ObsVector &, const ObsDiagnostics &) override

oops::Variables	requiredVars () const override

oops::Variables	requiredHdiagnostics () const override

Static Public Member Functions
static const std::string	classname ()

Private Member Functions
void	print (std::ostream &) const override

void	applyFilter (const std::vector< bool > &, const Variables &, std::vector< std::vector< bool >> &) const override

int	qcFlag () const override

std::string	getPGEsubstituteName (const std::string &varname) const

void	setFlags (const std::string &varname, const std::vector< bool > &apply, std::vector< bool > &flagged) const

Private Attributes
Parameters_	parameters_
	Parameters used in this filter. More...

Additional Inherited Members
Protected Attributes inherited from ufo::FilterBase
const eckit::LocalConfiguration	config_

ufo::Variables	filtervars_

Protected Attributes inherited from ufo::ObsProcessorBase
ioda::ObsSpace &	obsdb_

std::shared_ptr< ioda::ObsDataVector< int > >	flags_

std::shared_ptr< ioda::ObsDataVector< float > >	obserr_

ufo::Variables	allvars_

ObsFilterData	data_

Detailed Description

BayesianBackgroundQCFlags: apply QC flags based on values of probability of gross error (PGE). If the PGE is larger than the threshold PGEcrit then the observation is rejected. If the Bayesian background or buddy checks were applied, use the PGE that was obtained from those checks. Sometimes the PGE of one variable is used to set the QC flags of another; this happens for (e.g.) wind u and v components.

todo(UKMO): deal with Pstar/Pmsl and u10AmbWind/v10AmbWind (as they are known in OPS). These are each treated slightly differently in the OPS code.

Definition at line 59 of file BayesianBackgroundQCFlags.h.

Member Typedef Documentation

◆ Parameters_

typedef BayesianBackgroundQCFlagsParameters ufo::BayesianBackgroundQCFlags::Parameters_

Definition at line 62 of file BayesianBackgroundQCFlags.h.

Constructor & Destructor Documentation

◆ BayesianBackgroundQCFlags()

ufo::BayesianBackgroundQCFlags::BayesianBackgroundQCFlags	(	ioda::ObsSpace &	obsdb,
		const Parameters_ &	parameters,
		std::shared_ptr< ioda::ObsDataVector< int > >	flags,
		std::shared_ptr< ioda::ObsDataVector< float > >	obserr
	)

Definition at line 24 of file BayesianBackgroundQCFlags.cc.

◆ ~BayesianBackgroundQCFlags()

ufo::BayesianBackgroundQCFlags::~BayesianBackgroundQCFlags ( )

Definition at line 34 of file BayesianBackgroundQCFlags.cc.

Member Function Documentation

◆ applyFilter()

void ufo::BayesianBackgroundQCFlags::applyFilter	(	const std::vector< bool > &	apply,
		const Variables &	filtervars,
		std::vector< std::vector< bool >> &	flagged
	)		const

overrideprivatevirtual

Implements ufo::FilterBase.

Definition at line 118 of file BayesianBackgroundQCFlags.cc.

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◆ classname()

static const std::string ufo::BayesianBackgroundQCFlags::classname ( )

inlinestatic

Definition at line 64 of file BayesianBackgroundQCFlags.h.

◆ getPGEsubstituteName()

std::string ufo::BayesianBackgroundQCFlags::getPGEsubstituteName ( const std::string & varname ) const

private

Get the name of the variable whose PGE is tested in order to set the QC flags for the variable varname. By default, varname is returned by this routine; any substitutions are listed in the PGEsubstituteNames parameter.

Definition at line 38 of file BayesianBackgroundQCFlags.cc.

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